Insertion junction: CLIP2.063412_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063412
Chromosome:chromosome 3
Location:818582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146347 (1 of 3) PTHR11220//PTHR11220:SF1 - HEME-BINDING PROTEIN-RELATED // HEME-BINDING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGGCACTACAGAGGCACGCTCGGCTTAAACAGCTCAGCAGCAACAC
Internal bar code:TGGGGGGTCGCTGTTCTCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGCTAATGATTGCTGTG
Suggested primer 2:TGTTACACAGGTCGACGTGG