Insertion junction: CLIP2.063418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063418
Chromosome:chromosome 10
Location:6609477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465850 (1 of 1) K12572 - PAB-dependent poly(A)-specific ribonuclease subunit 3 (PAN3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCACCTGGTTTGGCTATGTGCCTGTGGAAACCGACCCCGGCTATGTC
Internal bar code:ACTGGCTAGCGGAACATGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4082
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAAGGGAACTCGGAATC
Suggested primer 2:GTGGTGTACGTGGACGAGTT