Insertion junction: CLIP2.063420_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063420
Chromosome:chromosome 17
Location:4680758
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g732650 (1 of 1) K17601 - WD repeat-containing protein 81 (WDR81) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTACTGGAGGGGGAGGTACTGGAGGGGAAGGTACTGGAGGAGGAGGTA
Internal bar code:ATAAGTGATAAATACATAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1490
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGGCAATAAGCTTGCTC
Suggested primer 2:CAGATCTACACGGCCCTGTC