Insertion junction: CLIP2.063421_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063421
Chromosome:chromosome 2
Location:2175239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089450 HRP5 Hydroxyproline-rich glycoprotein 5'UTR
Cre02.g089500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACGCATCAAAGACATAGCCCATAGTACTAGACACTTACGCAAGTCCA
Internal bar code:TTGAATGGTAGAAGGAAGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTACAGTGCACAAGGGA
Suggested primer 2:GGCGGCATGATTAACACGTC