Insertion junction: CLIP2.063426_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063426
Chromosome:chromosome 9
Location:5883801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411900 SHMT3 (1 of 3) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase; Serine hydroxymethyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTGATGTAATATTGCGCTCTGCAGACCAAGTTGTCAGCGCTAGTAAT
Internal bar code:TTATGATGGCCTGCCGAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TATACGATGTCGCGGGTGTG
Suggested primer 2:GAGCACTAATCTCCGGGTCG