Insertion junction: CLIP2.063432_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063432
Chromosome:chromosome 12
Location:9868398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544327 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTGGGAACCCGGCAGTGCTAGAAGCATCCGCGCCAGATCGGCGGGC
Internal bar code:TATCGAGGAGCGCCACTGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1454
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGCCCAAATGACTCAC
Suggested primer 2:GAGGAGTTGCGGGAAACTGA