Insertion junction: CLIP2.063435_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063435
Chromosome:chromosome 3
Location:3201921
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g165200 APG7 Autophagy-related protein, ubiquitin-activating enzyme E1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGCTGGCAGAAGGCGGCGC
Internal bar code:TAATGTCAAGTATATGCCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGATGTCTCGGCACAGG
Suggested primer 2:CATCCGGTCCTTCAAGCAGT