Insertion junction: CLIP2.063436_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063436
Chromosome:chromosome 10
Location:5124472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455300 SMP1 (1 of 1) K11088 - small nuclear ribonucleoprotein D3 (SNRPD3, SMD3); Small nuclear ribonucleoprotein SmD3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATTCCACAGACTGTCTTTGTGTCTGCATGCGCATGTAATGCTCATG
Internal bar code:GACTCGATCAGGCGACGCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTGTGGTGTTGCATGG
Suggested primer 2:GAGAGATGTACCGTGGCGAG