Insertion junction: CLIP2.063440_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063440
Chromosome:chromosome 11
Location:1681061
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g468353 (1 of 2) PTHR11537//PTHR11537:SF14 - VOLTAGE-GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGACCGAACCAAACCAAACCAGACCAAGCGAGTCTAGGGGGAGGGGG
Internal bar code:CTGGTCCTGGCTTTTGCCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGTTGAGGAGTGAGG
Suggested primer 2:GTACCAAGTCGAGCCCAACA