Insertion junction: CLIP2.063441_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063441
Chromosome:chromosome 17
Location:4581519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732000 ATP9A (1 of 2) K02128 - F-type H+-transporting ATPase subunit c (ATPeF0C, ATP5G, ATP9); Mitochondrial F1F0 ATP synthase subunit 9, isoform A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGAGCTCTCGGACTCGGGGGTGGCGCGGAGCTGGAGGAGCGGTCTCG
Internal bar code:AGTTGTCGAATATAGGGCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3411
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCACGTGTTCTGTCCTA
Suggested primer 2:TTGTTGCAAGGCTGACATGC