Insertion junction: CLIP2.063465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063465
Chromosome:chromosome 9
Location:4585052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTTATGGCACCCGCCACGGCACGCCTTGCAAGCTGTGCTGCCCTTG
Internal bar code:GCCACACTTTGATATAGGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACTACGACGCGCAAACG
Suggested primer 2:GACGACCGACCCTGAACTTT