Insertion junction: CLIP2.063465_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063465
Chromosome:chromosome 9
Location:4585063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATAAGGCGGCAAGTGTGGGCCGTTTGGGTCACTTTCCGTCAGGGCCGG
Internal bar code:CTTCTACGGAGATGTAATTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2691
LEAP-Seq percent confirming:64.3678
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACCGACCCTGAACTTT
Suggested primer 2:CTTACTACGACGCGCAAACG