Insertion junction: CLIP2.063477_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063477
Chromosome:chromosome 2
Location:4340262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105150 (1 of 1) 4.1.1.19 - Arginine decarboxylase / L-arginine carboxy-lyase 5'UTR
Cre02.g105200 (1 of 2) K12382 - saposin (PSAP, SGP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCCCTAGTCATTTGGCCTGGCTCCGCCGAAGCATGCATTAAGAACTC
Internal bar code:GTATCCCTAGTGACTAACGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGAGCAGAAGAGGG
Suggested primer 2:ATTGAGTACTACGCTCGCCG