Insertion junction: CLIP2.063480_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063480
Chromosome:chromosome 5
Location:89303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGTGAGGTTGCCGTAGCCCCGTAATGTGCAGCATATGCCCAGGCCCC
Internal bar code:GAGATTGGTCGGATCAATCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2085
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCAACGGTTTGTGCAG
Suggested primer 2:CGCTTGCTCACTTGCTTGTT