Insertion junction: CLIP2.063486_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063486
Chromosome:chromosome 7
Location:4949283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTAACAATCCAGTTCCAGGCGATAAGCTCGCAGCTCTTTCTCTAATT
Internal bar code:CTGGAAAGGACGTCATGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACTCGCATGCCACATGC
Suggested primer 2:CATATGCCACGCAGGTTTCG