Insertion junction: CLIP2.063487_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063487
Chromosome:chromosome 3
Location:730413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145947 5'UTR
Cre03.g145967 (1 of 2) K15437 - aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (AIMP1, ARC1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCCTCCACGCTTAGGACTTTCGCTCCCCAGCACACATCCTGCTCCT
Internal bar code:TTATTAATGGGGGCACTCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:69.7674
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATATGAAGACCGACGCA
Suggested primer 2:GTTGGAGTGCATGTGCGTTT