Insertion junction: CLIP2.063493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063493
Chromosome:chromosome 1
Location:2731499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016528 (1 of 1) 4.2.1.109 - Methylthioribulose 1-phosphate dehydratase / 1-PMT-ribulose dehydratase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACGTGTGGCAAACTGCAGACTGCAGACCCCGGCATTGACGTGCTTG
Internal bar code:AGTGTAGCATAGTCGTAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1034
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGTAGAGGATGTCGGT
Suggested primer 2:ACGTCTGTGCTTGCATACCA