Insertion junction: CLIP2.063501_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063501
Chromosome:chromosome 10
Location:3066557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441100 PIGT,GPIT1,GPI16,GIT1,PIGT1 GPI transamidase component Gpi16; (1 of 1) K05292 - phosphatidylinositol glycan, class T (PIGT) 5'UTR
Cre10.g441150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGATACTGTACACTAGGCTAGTCACACTTCCAATATTCTGCGAGCC
Internal bar code:TAAGGGAAATTGGTTAGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTCACAGTCACGGACGG
Suggested primer 2:CGCGGCCAGGGATTTTAATG