Insertion junction: CLIP2.063502_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063502
Chromosome:chromosome 17
Location:2103642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802047 (1 of 14) IPR002156//IPR012337 - Ribonuclease H domain // Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAAAAGACCACCGCGCAAACTAGGTACCAAGTCTACTGAACCAGCCA
Internal bar code:GCTATAAACAGAATTCTTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:765
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTTCCCATTCCACCAGG
Suggested primer 2:ACCTGCCGGTATCTGGTTTG