Insertion junction: CLIP2.063508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063508
Chromosome:chromosome 9
Location:987398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402602 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTGTGGCAGTGATGATTGGCCGGGTTGAAAGTAGTCGACGACTCTTC
Internal bar code:CAACTCAGTATCTTAAGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACGTACACAGTCACACG
Suggested primer 2:AGGCCTCAGACTGGAGACAT