Insertion junction: CLIP2.063530_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063530
Chromosome:chromosome 3
Location:4241499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173900 (1 of 5) IPR001841//IPR013083 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTCGGACTTTGCTGGTCGCACGCGTTATGGGCCTAATGTGTAGGGA
Internal bar code:TATCAGGATATACCTTGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3208
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTAACGTGTCGCACACC
Suggested primer 2:GATTAAGTGCCGCGCTTGAG