Insertion junction: CLIP2.063540_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063540
Chromosome:chromosome 2
Location:5152211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111800 5'UTR
Cre02.g111850 (1 of 5) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATACCCTCTTTGAGTACAAGCTTGACACGAACTCTGCCTGGAACTTA
Internal bar code:TATAAGGTAGGTGGCAAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1465
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCTGAGTGATGGCGTCC
Suggested primer 2:ACGCTCTACTGGTGCTCCTA