Insertion junction: CLIP2.063541_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063541
Chromosome:chromosome 1
Location:5216773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036400 SDR3 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.313 - Sulfoacetaldehyde reductase 3'UTR
Cre01.g036451 SMM2 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTATGAGCGGTGACCAGGGATGGTATGGTTGGAACGGACTACGGAGG
Internal bar code:ATTCATTAGTAGTCAGTGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5153
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCTCTACGATGCGTTG
Suggested primer 2:GCGCGTAAAAGAGCAGTAGC