Insertion junction: CLIP2.063542_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063542
Chromosome:chromosome 7
Location:5834944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353600 MMP7 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATATGGCACCTGCTCCCCCCTGTGTCCCCCTTCTTGATAGACAATTAG
Internal bar code:TTCACGAGCAACGGGCATCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1667
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCGCCCATGATGTGTTT
Suggested primer 2:CACTTCACACTTGCATGGCC