Insertion junction: CLIP2.063562_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063562
Chromosome:chromosome 12
Location:2731290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504500 HTA15,HTA16 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTTTCTCAACACCACCTCTCATTGCGGCACCGGGGCTTGGGTTGGCT
Internal bar code:CCATATGGAAGTGATCCCATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1836
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCGCTTATCACGACCCA
Suggested primer 2:GAGCGGTTGTTTGACCCAAC