Insertion junction: CLIP2.063563_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063563
Chromosome:chromosome 17
Location:792608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701450 (1 of 12) PTHR13078:SF22 - MAOC-LIKE DEHYDRATASE DOMAIN-CONTAINING PROTEIN 3'UTR
Cre17.g701500 DNJ1 (1 of 1) K09503 - DnaJ homolog subfamily A member 2 (DNAJA2); DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGAGCTTCTGTACTTCTGTTACGCGGCGTTGGCGAGAGCCACGAATGG
Internal bar code:GCGATGACGGTATTCTTTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1761
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTACTACGACCCGTACG
Suggested primer 2:CCAGCTACGAGTCGGATGAC