Insertion junction: CLIP2.063564_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063564
Chromosome:chromosome 11
Location:2646365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095079 (1 of 2) IPR000104//IPR011705 - Antifreeze protein, type I // BTB/Kelch-associated 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAGCCCAGCATGTACGACACACGTGCATGCTGCCGTACCTGAAACAC
Internal bar code:GTTCGCGGCGGAAGACTCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2033
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAGTGCAATGCAGATAA
Suggested primer 2:CAGCAATTGGATGGCCGATG