Insertion junction: CLIP2.063568_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063568
Chromosome:chromosome 5
Location:2302330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238250 BLZ2,BZIP1 (1 of 1) K04450 - cyclic AMP-dependent transcription factor ATF-2 (ATF2, CREBP1); Basic leucine zipper1 transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCGTCTCTACGACGGCAGACGGCCGGCAGACGGGCAGGGAGCTTAAA
Internal bar code:GGGATACGGCGGGCTAGGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:477
LEAP-Seq percent confirming:2.53165
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGCGTCACACTCAAAGA
Suggested primer 2:GCATGCGAGCTCTGATGTTG