Insertion junction: CLIP2.063568_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063568
Chromosome:chromosome 5
Location:2302335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238250 BLZ2,BZIP1 (1 of 1) K04450 - cyclic AMP-dependent transcription factor ATF-2 (ATF2, CREBP1); Basic leucine zipper1 transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTTTATTCCCGGCCTGCCTGCGAGGCTGACTCCCATAACTCGCGTGA
Internal bar code:TTAAGACAACCGTTCGTGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1464
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCGAGCTCTGATGTTG
Suggested primer 2:GGAGGCGTCACACTCAAAGA