Insertion junction: CLIP2.063601_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063601
Chromosome:chromosome 3
Location:1025622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148100 (1 of 1) PTHR10281:SF4 - NEUFERRICIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCATGTGGGTTATGGAGGACGCGAGACTGAAAGTGGGTAATGAGGAT
Internal bar code:CGGGCTCAAGAGTAGTTAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AATTTTCACGGTTGCGTGGG
Suggested primer 2:TGTCAGCTCACCGTTCATCC