Insertion junction: CLIP2.063611_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063611
Chromosome:chromosome 11
Location:1844906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467400 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGCACTCCTGCCCCCAGCTCAACCCAGGCAAAGCAGCCCACTTGCA
Internal bar code:ACAGGTTCTCAGGGTGGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTGACAGCTCCGAGAG
Suggested primer 2:AAACCGCAATGAGGTACCGT