Insertion junction: CLIP2.063616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063616
Chromosome:chromosome 9
Location:5700819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTATTTCGGGCTAAGTAGACGCTTCAGTTCCTTCCCTGGGTGGCAGG
Internal bar code:GGATTGTACGCACAGATCCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCCTGGCGGTTCTCTCG
Suggested primer 2:TTCTTAACTGTGGCGCGAGT