Insertion junction: CLIP2.063617_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063617
Chromosome:chromosome 5
Location:615437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244900 (1 of 1) PF01594 - Domain of unknown function DUF20 (UPF0118) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCCTGAGGGCTATTCGTGCTGAACTTACGTGCTGAACGAACTTGCAA
Internal bar code:CCGTGTGAGTAGCTAAACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:60
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCATTGTCGCCATTAGG
Suggested primer 2:CAGCGCTGGGTTAGGATAGG