Insertion junction: CLIP2.063620_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063620
Chromosome:chromosome 8
Location:3471001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378700 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATACGCAATTATGCTCAACGGCTAGATGCCTTGCAGCACTCCAACGA
Internal bar code:TGTGTTGATGGTAGAACGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCATCCCATCCACACTG
Suggested primer 2:TCGAGTCGGTGAGTCTCCAT