Insertion junction: CLIP2.063632_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063632
Chromosome:chromosome 8
Location:4037557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382689 (1 of 4) K08770 - ubiquitin C (UBC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAACAAGTAATGGGCTGAAGTGACGCAGGATGGGTGGCCAGTCTGGT
Internal bar code:CTTAACCACGAAGCATGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1765
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAACGAGGGACTGTCG
Suggested primer 2:TACTATACCGCTGCTGCTGC