Insertion junction: CLIP2.063633_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063633
Chromosome:chromosome 10
Location:3071358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441200 LAL3 La-domain RNA-binding protein; (1 of 1) K18757 - la-related protein 1 (LARP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTAAGCAATGCGTCCGCGCATCTATAGCAGACAGAAAGCCCCCGCTT
Internal bar code:GTAAACTGTAAACATTTCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAGTGAGGCAGACAAT
Suggested primer 2:ATGATGCTAGGCTTGCTGCA