Insertion junction: CLIP2.063641_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063641
Chromosome:chromosome 1
Location:3733026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024300 (1 of 1) K11866 - STAM-binding protein (STAMBP, AMSH) 3'UTR
Cre01.g024350 (1 of 2) PTHR10766//PTHR10766:SF49 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACACATACTTGATAGCATATTCAGTTTGCCCGTCCCACCTTGCCTCC
Internal bar code:TTCTTGAACCATCGTCGACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5648
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTTCCTGATGCTGGGCA
Suggested primer 2:TTCTTCATTCCCGTCGTGCA