Insertion junction: CLIP2.063642_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063642
Chromosome:chromosome 4
Location:1133281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215900 (1 of 2) IPR006212//IPR009030//IPR011641 - Furin-like repeat // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGAACAGTTCTGTGTGGGGTGAGGGGGGTTTGAACTAGAGTGCATGGA
Internal bar code:GGGTGCGTCGGTTGCGGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2707
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGAGCACCGGTAGCAA
Suggested primer 2:ACTACTGCACCCTGCTTTCC