Insertion junction: CLIP2.063672_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063672
Chromosome:chromosome 9
Location:3066373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393913 (1 of 1) 3.5.4.16 - GTP cyclohydrolase I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTTTCGGGAGACTTGGGCAGGGCCCGGTGCATGGGATTGTTTTTTCG
Internal bar code:AGTAGATATTGTCACGTCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2091
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTAGGCAGTGACAGTGG
Suggested primer 2:CGGTGAGCTACTGATCGCAT