Insertion junction: CLIP2.063679_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063679
Chromosome:chromosome 6
Location:1237596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258600 (1 of 2) K01061 - carboxymethylenebutenolidase (E3.1.1.45) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCGCTGGACCGGCATGCATGGCGCTGCTGTGTGATAGGACAATCGG
Internal bar code:CGATTCGCACTTTCGGGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTGAGTGTGAGAGA
Suggested primer 2:GAGTCGACAAGCCCCAAGAA