Insertion junction: CLIP2.063682_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063682
Chromosome:chromosome 11
Location:2123321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467745 GCP3 (1 of 1) K16570 - gamma-tubulin complex component 3 (TUBGCP3, GCP3); Gamma tubulin interacting protein 3'UTR
Cre11.g467746 (1 of 4) PF04825 - N terminus of Rad21 / Rec8 like protein (Rad21_Rec8_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGTAAGAAGCCACGCCATGAAGCGAACACTGCATGCAGCGATGAC
Internal bar code:AGATCTGGCACGGCGTCGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGAGGCACCTGGAATG
Suggested primer 2:GCAAGTTGCAAGATGGCCAA