Insertion junction: CLIP2.063717_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063717
Chromosome:chromosome 10
Location:4092176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448250 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACTCAGTCGCACGCAGATTGCGCGTGGCGCCATATCGTTTGATTTCC
Internal bar code:ACCGTCTTCAAAAGTTGTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1180
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AACACATTGTTCGCGTGTGG
Suggested primer 2:TCTCATCGGTCGTATGCGTG