Insertion junction: CLIP2.063719_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063719
Chromosome:chromosome 3
Location:4492403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175750 (1 of 1) PTHR12461:SF2 - JMJC DOMAIN-CONTAINING PROTEIN 7 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAAAACCCGCGATGGACGTGGCAGGCTGTGCCGGCAATCGGTGGCA
Internal bar code:CCTCGTCGAGCGTTGGGGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1823
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTAGATCGGAGAGGTGC
Suggested primer 2:GTGGAGAGGAGGGCTACAGA