Insertion junction: CLIP2.063722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063722
Chromosome:chromosome 11
Location:593432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTATGTGCGCTGGCTGCTGGTCAGGATGAATGGCAGCTCCCAAGCTGG
Internal bar code:CTAGCGCGTCTCAGCGATACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGGTGGTGCATTAGTCC
Suggested primer 2:ACCGTACCAAAGCCTCCAAG