Insertion junction: CLIP2.063722_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063722
Chromosome:chromosome 11
Location:593436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTGCCCCAGTAAATGCACTGGGCCTCACCAGACCATACCAAACCAG
Internal bar code:CTAGCGCGTCTCAGCGATACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTACCAAAGCCTCCAAG
Suggested primer 2:TGGTGGTGGTGCATTAGTCC