Insertion junction: CLIP2.063723_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063723
Chromosome:chromosome 6
Location:3602098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278131 (1 of 1) IPR000104//IPR002083//IPR008974 - Antifreeze protein, type I // MATH/TRAF domain // TRAF-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGCTAGACGGGCGAAACGCTCGCATGTTCGGCCATCATGGCCTTG
Internal bar code:TATGCATGTTCTTGGGCGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3826
LEAP-Seq percent confirming:44.7619
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTAGGCCAAGTCCCTG
Suggested primer 2:GCGTGTTGCTTGCTTTCTGA