Insertion junction: CLIP2.063723_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063723
Chromosome:chromosome 6
Location:3602099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278131 (1 of 1) IPR000104//IPR002083//IPR008974 - Antifreeze protein, type I // MATH/TRAF domain // TRAF-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAATCAGTGTCTCGGGCCTGCTCATGATCCACACTCCGCGTTCCCAA
Internal bar code:TCGTTAATATGTTAGTCGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3048
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTGCTTGCTTTCTGA
Suggested primer 2:TTGCTTAGGCCAAGTCCCTG