Insertion junction: CLIP2.063728_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063728
Chromosome:chromosome 3
Location:2826112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162000 TPT8,TPT7 UMAMIT (Usually Multiple Acids Move In and Out Transporters) type transporter; (1 of 5) PTHR11132//PTHR11132:SF101 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGTTACTGAAGAGACTGTGAAAAGAGAGCTGTAGAGAACCCGCCCGC
Internal bar code:CGTAACCAGTAATACGTTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1856
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGTTTCTGTCATGTCCG
Suggested primer 2:TGTACAAGTGAGTGCCGTCC