Insertion junction: CLIP2.063730_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063730
Chromosome:chromosome 12
Location:3443517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497500 SNE7 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Cinnamoyl-CoA reductase/flavanone 4-reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCTTGCCCCTGGCAAAGCCCCGTTCGCCTTGGTTAGCACATCCTGCC
Internal bar code:GGCTTTACGGTCCTATTCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1987
LEAP-Seq percent confirming:71.9298
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCATACATGGTGGCAAG
Suggested primer 2:ATTGTGTCTGACGAGCTGGG