Insertion junction: CLIP2.063732_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063732
Chromosome:chromosome 1
Location:222864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001350 ABC1 (1 of 3) 3.6.3.47 - Fatty-acyl-CoA-transporting ATPase; ABC transporter 5'UTR
Cre01.g001400 ZMP1 (1 of 1) 3.4.24.36 - Leishmanolysin / Promastigote surface endopeptidase; Zinc-metallopeptidase-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTATACAGAACGCAGGACAACTACTCGTTTAACCAAACTACAACCTGCA
Internal bar code:TTCTGTTTGAGGTTCATGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGGCAAAGAGGTATGT
Suggested primer 2:AGCTTGCGCTTGAAATTGCA